Gouin A. et al.
Two genomes of highly polyphagous lepidopteran pests (Spodoptera frugiperda, Noctuidae) with different host-plant ranges.
Scie. Rep. (2017) Sep. 7(1):11816.
doi: 10.1038/s41598-017-10461-4

Belda E. et al.
Accurate microbial genome annotation using an integrated and user-friendly environment for community expertise of gene functions: The MicroScope Platform. In
Hydrocarbon and Lipid Microbiology Protocols: Genetic, Genomic and System Analyses of Pure Cultures (2017) pp 141-169. Berlin, Heidelberg
doi:

Medigue C. et al.
MicroScope-an integrated resource for community expertise of gene functions and comparative analysis of microbial genomic and metabolic data. In
Brief Bioinformatics (2017) Sep.
doi: 10.1093/bib/bbx11

Payelleville A. et al.
DNA adenine methyltransferase (Dam) overexpression impairs Photorhabdus luminescens Motility and Virulence.
Front Microbiol. (2017) Sep. 8: 1671
doi: 10.3389/fmicb.2017.01671

Rochat T. et al.
Genomic characterization of Flavobacterium psychrophilum serotypes and development of a multiplex PCR-based serotyping scheme.
Front in Microbiol.(2017) Sep. 8:1752.
doi: 10.3389/fmicb.2017.01752

Chaignaud P. et al.
Genomic and transcriptomic analysis of growth-supporting dehalogenation of chlorinated methanes in Methylobacterium.
Front Microbiol. (2017) Se. 8:1600.
doi: 10.3389/fmicb.2017.01600

Su XP. et al.
NSD1 inactivation and SETD2 mutation drive a convergence toward loss of function of H3K36 writers in Clear Cell Renal Cell Carcinomas.
Cancer Res. (2017) Sept. 77 (18): 4835-4845
doi: 10.1158/0008-5472.CAN-17-0143

Ivanova ELet al.
Homozygous truncating variants in TBC1D23 cause Pontocerebellar Hypoplasia and alter cortical development.
Am J Hum Genet. (2017) Sep. 101(3):428-440.
doi: 10.1016/j.ajhg.2017.07.010

Martin G. et al.
Evolution of the Banana genome (Musa acuminata) is Impacted by large chromosomal translocations.
Mol Biol Evol. (2017) Sep. 34(9):2140-2152.
doi: 10.1093/molbev/msx164

Madoui MA. et al.
New insights into global biogeography, population structure and natural selection from the genome of the epipelagic copepod Oithona.
Mol Ecol. (2017) Sep. 26(17):4467-4482.
doi: 10.1111/mec.14214

Arrigoni R. et al.
A new sequence data set of SSU rRNA gene for Scleractinia and its phylogenetic and ecological applications.
Mol Ecol Resour. (2017) Sep. 17(5):1054-1071.
doi: 10.1111/1755-0998.12640

Argout X. et al.
The cacao Criollo genome v2.0: an improved version of the genome for genetic and functional genomic studies.
BMC Genomics (2017), Sep. 18(1):730.
doi: 10.1186/s12864-017-4120-9

Ivanova C. et al.
Genome sequencing and transcriptome analysis of Trichoderma reesei QM9978 strain reveals a distal chromosome translocation to be responsible for loss of vib1 expression and loss of cellulase induction.
Biotechnology for Biofuels (2017) Sep. 10:209.
doi: 10.1186/s13068-017-0897-7

Cohen-Boulakia S. et al.
Scientific workflows for computational reproducibility in the life sciences: Status, challenges and opportunities.
Future Generation Computer Systems (2017) Oct. 75:284-298.
doi: 10.1016/j.future.2017.01.012

Frachon L. et al.
Intermediate degrees of synergistic pleiotropy drive adaptive evolution in ecological time.
Nature Ecology Evolution (2017) Oct. 1:1551–1561
doi: 10.1038/s41559-017-0297-1

Saudemont B. et al.
The fitness cost of mis-splicing is the main determinant of alternative splicing patterns.
Genome Biology (2017) Oct. 18(1):208.
doi: 10.1186/s13059-017-1344-6

Loire E. et al.
Do changes in gene expression contribute to sexual isolation and reinforcement in the house mouse?
Mol Ecol. (2017) Oct. 26(19):5189-5202.
doi: 10.1111/mec.14212

Varrault A. et al.
Identification of Plagl1/Zac1 binding sites and target genes establishes its role in the regulation of extracellular matrix genes and the imprinted gene network.
Nucleic Acids Res. (2017) Oct 13.45(18):10466-10480.
doi: 10.1093/nar/gkx672

Ceolin L. et al.
Cell Type-Specific mRNA Dysregulation in Hippocampal CA1 Pyramidal Neurons of the Fragile X Syndrome Mouse Model.
Front Mol Neurosci. (2017) Oct. 10:340.
doi: 10.3389/fnmol.2017.00340

Plouhinec JL. et al.
A molecular atlas of the developing ectoderm defines neural, neural crest, placode, and nonneural progenitor identity in vertebrates.
PLoS Biol. (2017) Oct. 15(10):e2004045.
doi: 10.1371/journal.pbio.2004045

Terrat S. et al.
Mapping and predictive variations of soil bacterial richness across France.
PLoS One (2017) Oct. 12(10):e0186766.
doi: 10.1371/journal.pone.0186766

Schmidt MHW. et al.
De novo assembly of a new Solanum pennellii accession using nanopore sequencing.
Plant Cell (2017) Oct. 29(10):2336-2348.
doi: 10.1105/tpc.17.00521

Recanati A. et al.
A spectral algorithm for fast de novo layout of uncorrected long nanopore reads.
Bioinformatics (2017) Oct. 33(20):3188-3194.
doi: 10.1093/bioinformatics/btx370

Lanaud C. et al.
Deciphering the Theobroma cacao self-incompatibility system: from genomics to diagnostic markers for self-compatibility.
J Exp Bot. (2017) Oct. 68(17):4775-4790.
doi: 10.1093/jxb/erx293

Gervais J. et al.
Different waves of effector genes with contrasted genomic location are expressed by Leptosphaeria maculans during cotyledon and stem colonization of oilseed rape.
Mol Plant Pathol. (2017) Oct. 18(8):1113-1126.
doi: 10.1111/mpp.12464

Fournier T. et al.
High-Quality de novo genome assembly of the Dekkera bruxellensis yeast using nanopore MinION sequencing.
G3 (2017) Oct. 7(10):3243-3250.
doi: 10.1534/g3.117.300128

Danchin EGJ. et al.
The transcriptomes of Xiphinema index and Longidorus elongatus suggest independent acquisition of some plant parasitism genes by horizontal gene transfer in early-branching Nematodes.
Genes (2017) Oct. 8(10). pii: E287.
doi: 10.3390/genes8100287

Bal E. et al.
Mutations in ACTRT1 and its enhancer RNA elements lead to aberrant activation of Hedgehog signaling in inherited and sporadic basal cell carcinomas.
Nat Med. (2017) Oct. 23(10):1226-1233.
doi: 10.1038/nm.4368