Publications
Aurélie Nakamura et al.
Epigenome-Wide Associations of Placental DNA Methylation and Behavioral and Emotional Difficulties in Children at 3 Years of Age
International Journal of Molecular Sciences 2023, vol. 24, issue 14
doi: 10.3390/ijms241411772
Amandine Desette et al.
Deciphering Brain Metastasis Stem Cell Properties From Colorectal Cancer Highlights Specific Stemness Signature and Shared Molecular Features
Cellular and Molecular Gastroenterology and Hepatology 2023, vol. 16, issue 5
doi: 10.1016/j.jcmgh.2023.07.008
Paulina Jedynak et al.
Prenatal exposure to triclosan assessed in multiple urine samples and placental DNA methylation
Environmental Pollution 2023, vol. 335
doi: 10.1016/j.envpol.2023.122197
Jorg Tost et al.
Do not be scared of the genome’s 5th base—Explaining phenotypic variability and evolutionary dynamics through DNA methylation analysis
Molecular Ecology Resources 2023, vol. 23, issue 7
doi: 10.1111/1755-0998.13824
Rania El-Botty et al.
Oxidative phosphorylation is a metabolic vulnerability of endocrine therapy and palbociclib resistant metastatic breast cancers
Nature Communications 2023, vol. 14, issue 1
doi: 10.1038/s41467-023-40022-5
Wladimir Malaga et al.
Natural mutations in the sensor kinase of the PhoPR two-component regulatory system modulate virulence of ancestor-like tuberculosis bacilli
PLOS Pathogens 2023, vol. 19, issue 7
doi: 10.1371/journal.ppat.1011437
Dimitry Y. Sorokin et al.
Trichlorobacter ammonificans, a dedicated acetate-dependent ammonifier with a novel module for dissimilatory nitrate reduction to ammonia
The ISME Journal 2023
doi: 10.1038/s41396-023-01473-2
Lamia Madaci et al.
The Contribution of Multiplexing Single Cell RNA Sequencing in Acute Myeloid Leukemia
Diseases 2023, vol. 11, issue 3
doi: 10.3390/diseases11030096
Margaux Sivori et al.
The pelvic organs receive no parasympathetic innervation
2023
doi: 10.1101/2023.07.11.548500
Marin Truchi et al.
Detecting subtle transcriptomic perturbations induced by lncRNAs Knock-Down in single-cell CRISPRi screening using a new sparse supervised autoencoder neural network
2023
doi: 10.1101/2023.07.11.548494
Mathieu Chicard et al.
Cell-Free DNA Extracted from CSF for the Molecular Diagnosis of Pediatric Embryonal Brain Tumors
Cancers 2023, vol. 15, issue 13
doi: 10.3390/cancers15133532
Kamar Ghaibour et al.
An Efficient Protocol for CUT&RUN Analysis of FACS-Isolated Mouse Satellite Cells
Journal of Visualized Experiments 2023, issue 197
doi: 10.3791/65215
Jeanlin Jourdain et al.
Large-scale detection and characterization of interchromosomal rearrangements in normozoospermic bulls using massive genotype and phenotype data sets
Genome Research 2023, vol. 33, issue 6
doi: 10.1101/gr.277787.123
Céline Derbois et al.
Single cell transcriptome sequencing of stimulated and frozen human peripheral blood mononuclear cells
Scientific Data 2023, vol. 10, issue 1
doi: 10.1038/s41597-023-02348-z
Joey Ward et al.
Polygenic risk of major depressive disorder as a risk factor for venous thromboembolism
Blood Advances 2023, vol. 7, issue 18
doi: 10.1182/bloodadvances.2023010562
Cyril Esnault et al.
G4access identifies G-quadruplexes and their associations with open chromatin and imprinting control regions
Nature Genetics 2023, vol. 55, issue 8
doi: 10.1038/s41588-023-01437-4
Eoghan King et al.
Paraburkholderia phytofirmans PsJN colonization of rice endosphere triggers an atypical transcriptomic response compared to rice native Burkholderia s.l. endophytes
Scientific Reports 2023, vol. 13, issue 1
doi: 10.1038/s41598-023-37314-7
Frédérik Oger et al.
Pharmacological HDAC inhibition impairs pancreatic β-cell function through an epigenome-wide reprogramming
iScience 2023, vol. 26, issue 7
doi: 10.1016/j.isci.2023.107231
Thomas Cokelaer et al.
Reprohackathons: promoting reproducibility in bioinformatics through training
Bioinformatics 2023, vol. 39, issue Supplement_1
doi: 10.1093/bioinformatics/btad227
Lola Welsch et al.
Mu Opioid Receptor–Positive Neurons in the Dorsal Raphe Nucleus Are Impaired by Morphine Abstinence
Biological Psychiatry 2023, vol. 94, issue 11
doi: 10.1016/j.biopsych.2023.06.024
Gaëlle Munsch et al.
Genome-wide association study of a semicontinuous trait: illustration of the impact of the modeling strategy through the study of Neutrophil Extracellular Traps levels
NAR Genomics and Bioinformatics 2023, vol. 5, issue 2
doi: 10.1093/nargab/lqad062
Isabelle Busseau et al.
Evaluation of microRNA variant maturation prior to genome edition
Biochimie 2023, vol. 217
doi: 10.1016/j.biochi.2023.06.007
Mathias Boulanger et al.
DeSUMOylation of chromatin-bound proteins limits the rapid transcriptional reprogramming induced by daunorubicin in acute myeloid leukemias
Nucleic Acids Research 2023, vol. 51, issue 16
doi: 10.1093/nar/gkad581
Tim A Steiert et al.
A critical spotlight on the paradigms of FFPE-DNA sequencing
Nucleic Acids Research 2023, vol. 51, issue 14
doi: 10.1093/nar/gkad519
Manuel Rodrigues et al.
Nivolumab plus chemoradiotherapy in locally-advanced cervical cancer: the NICOL phase 1 trial
Nature Communications 2023, vol. 14, issue 1
doi: 10.1038/s41467-023-39383-8
Marta Lourenço et al.
Phages against Noncapsulated Klebsiella pneumoniae: Broader Host range, Slower Resistance
Microbiology Spectrum 2023
doi: 10.1128/spectrum.04812-22
Guillaume Davidson et al.
Mesenchymal-like Tumor Cells and Myofibroblastic Cancer-Associated Fibroblasts Are Associated with Progression and Immunotherapy Response of Clear Cell Renal Cell Carcinoma
Cancer Research 2023, vol. 83, issue 17
doi: 10.1158/0008-5472.can-22-3034
Carlo Yague-Sanz et al.
Chromatin remodeling by Pol II primes efficient Pol III transcription
Nature Communications 2023, vol. 14, issue 1
doi: 10.1038/s41467-023-39387-4
Laura Tzeplaeff et al.
Mutant FUS induces chromatin reorganization in the hippocampus and alters memory processes
Progress in Neurobiology 2023, vol. 227
doi: 10.1016/j.pneurobio.2023.102483
Cyril Libourel et al.
Comparative phylotranscriptomics reveals ancestral and derived root nodule symbiosis programmes
Nature Plants 2023, vol. 9, issue 7
doi: 10.1038/s41477-023-01441-w