Publications
Morard R et al.
Surface ocean metabarcoding confirms limited diversity in planktonic foraminifera but reveals unknown hyper-abundant lineages
Scientific Reports 2018 8(1)
doi: 10.1038/s41598-018-20833-z
Meng A et al.
A de novo approach to disentangle partner identity and function in holobiont systems
Microbiome 2018 6(1)
doi: 10.1186/s40168-018-0481-9
Meng A et al.
Analysis of the genomic basis of functional diversity in dinoflagellates using a transcriptome-based sequence similarity network
Molecular Ecology 2018 27(10)
doi: 10.1111/mec.14579
Manzano-Marín A et al.
A Freeloader? The Highly Eroded Yet Large Genome of the Serratia symbiotica Symbiont of Cinara strobi
Genome Biology and Evolution 2018 10(9)
doi: 10.1093/gbe/evy173
Legras JL et al.
Adaptation of S. cerevisiae to Fermented Food Environments Reveals Remarkable Genome Plasticity and the Footprints of Domestication
Molecular Biology and Evolution 2018 35(7)
doi: 10.1093/molbev/msy066
Legendre M et al.
Diversity and evolution of the emerging Pandoraviridae family
Nature Communications 2018 9(1)
doi: 10.1038/s41467-018-04698-4
Leblanc K et al.
Nanoplanktonic diatoms are globally overlooked but play a role in spring blooms and carbon export
Nature Communications 2018 9(1)
doi: 10.1038/s41467-018-03376-9
Kazamia E et al.
Endocytosis-mediated siderophore uptake as a strategy for Fe acquisition in diatoms
Science Advances 2018 4(5)
doi: 10.1126/sciadv.aar4536
Karimi B et al.
Biogeography of soil bacteria and archaea across France
Science Advances 2018 4(7)
doi: 10.1126/sciadv.aat1808
Hume BCC et al.
An improved primer set and amplification protocol with increased specificity and sensitivity targeting the Symbiodinium ITS2 region
PeerJ 2018 6
doi: 10.7717/peerj.4816
Grébert T et al.
Light color acclimation is a key process in the global ocean distribution ofSynechococcus cyanobacteria
Proceedings of the National Academy of Sciences 2018 115(9)
doi: 10.1073/pnas.1717069115
Flegontova O et al.
Neobodonids are dominant kinetoplastids in the global ocean
Environmental Microbiology 2018 20(2)
doi: 10.1111/1462-2920.14034
Farhat S et al.
Comparative Time-Scale Gene Expression Analysis Highlights the Infection Processes of Two Amoebophrya Strains
Frontiers in Microbiology 2018 9
doi: 10.3389/fmicb.2018.02251
Duval C et al.
Phylogeny and salt-tolerance of freshwater Nostocales strains: Contribution to their systematics and evolution
Harmful Algae 2018 73
doi: 10.1016/j.hal.2018.01.008
Dutreux F et al.
De novo assembly and annotation of three Leptosphaeria genomes using Oxford Nanopore MinION sequencing
Scientific Data 2018 5
doi: DOI:10.1038/sdata.2018.235
Dias GM et al.
Vibrio tapetis Displays an Original Type IV Secretion System in Strains Pathogenic for Bivalve Molluscs
Frontiers in Microbiology 2018 9
doi: 10.3389/fmicb.2018.00227
Decelle J et al.
Worldwide Occurrence and Activity of the Reef-Building Coral Symbiont Symbiodinium in the Open Ocean
Current Biology 2018 28(22)
doi: 10.1016/j.cub.2018.09.024
Cubry P et al.
The Rise and Fall of African Rice Cultivation Revealed by Analysis of 246 New Genomes
Current Biology 2018 28(14)
doi: 10.1016/j.cub.2018.05.066
Chen NWG et al.
Horizontal gene transfer plays a major role in the pathological convergence of Xanthomonas lineages on common bean
BMC Genomics 2018 19(1)
doi: 10.1186/s12864-018-4975-4
Carradec Q et al.
A global ocean atlas of eukaryotic genes
Nature Communications 2018 9(1)
doi: 10.1038/s41467-017-02342-1
Belser C et al.
Chromosome-scale assemblies of plant genomes using nanopore long reads and optical maps
Nature Plants 2018 4(11)
doi: 10.1038/s41477-018-0289-4
Arsène-Ploetze F et al.
Adaptation in toxic environments: comparative genomics of loci carrying antibiotic resistance genes derived from acid mine drainage waters
Environmental Science and Pollution Research 2017 25(2)
doi: 10.1007/s11356-017-0535-8
Appels R et al.
Shifting the limits in wheat research and breeding using a fully annotated reference genome
Science 2018 361(6403)
doi: 10.1126/science.aar7191
Alberto FL et al.
Convergent genomic signatures of domestication in sheep and goats
Nat Commun. 2018 9(1)
doi: 10.1038/s41467-018-03206-y
Nadjet Belbachir et al.
RRAD mutation causes electrical and cytoskeletal defects in cardiomyocytes derived from a familial case of Brugada syndrome
European Heart Journal 2019, vol. 40, issue 37
doi: 10.1093/eurheartj/ehz308
G. Torres-Cortés et al.
Differences in resource use lead to coexistence of seed-transmitted microbial populations
Scientific Reports 2019, vol. 9, issue 1
doi: 10.1038/s41598-019-42865-9
Caroline L. Monteil et al.
Ectosymbiotic bacteria at the origin of magnetoreception in a marine protist
Nature Microbiology 2019, vol. 4, issue 7
doi: 10.1038/s41564-019-0432-7
Justine Jacquin et al.
Microbial Ecotoxicology of Marine Plastic Debris: A Review on Colonization and Biodegradation by the “Plastisphere”
Frontiers in Microbiology 2019, vol. 10
doi: 10.3389/fmicb.2019.00865
Ann C. Gregory et al.
Marine DNA Viral Macro- and Microdiversity from Pole to Pole
Cell 2019, vol. 177, issue 5
doi: 10.1016/j.cell.2019.03.040
Leandro Lima et al.
Comparative assessment of long-read error correction software applied to Nanopore RNA-sequencing data
Briefings in Bioinformatics 2019
doi: 10.1093/bib/bbz058