MicroScope

Dupont H. et al.
Structural alteration of OmpR as a source of ertapenem resistance in a CTX-M-15-producing Escherichia coli O25b:H4 sequence type 131 clinical isolate.
Antimicrob Agents Chemother. (2017) Apr. 61(5). pii: e00014-17.
doi: 10.1128/AAC.00014-17

Marchetti M. et al.
Experimental evolution of rhizobia may lead to either extra- or intracellular symbiotic adaptation depending on the selection regime.
Mol. Ecol. (2017) Apr. 26(7):1818-1831.
doi: 10.1111/mec.13895

Tran TTT. et al.
Comparative genome analysis provides insights into both the lifestyle of Acidithiobacillus ferrivorans Strain CF27 and the chimeric nature of the iron-oxidizing Acidithiobacilli genomes.
Front Microbiol. (2017) Jun. 8:1009.
doi: 10.3389/fmicb.2017.01009

Bringel F. et al.
Genome sequence of the dichloromethane-degrading Bacterium Hyphomicrobium sp. strain GJ21.
Genome Announc. (2017) Jul. 5(30). pii: e00622-17.
doi: 10.1128/genomeA.00622-17

Pancrace C. et al.
Rearranged biosynthetic gene cluster and synthesis of hassallidin E in Planktothrix serta PCC 8927.
ACS Chem Biol. (2017) Jul. 12(7):1796-1804.
doi: 10.1021/acschembio

Medigue C. et al.
MicroScope-an integrated resource for community expertise of gene functions and comparative analysis of microbial genomic and metabolic data. In
Brief Bioinformatics (2017) Sep.
doi: 10.1093/bib/bbx11

Blanchard L. et al.
Conservation and diversity of the IrrE/DdrO-controlled radiation response in radiation-resistant Deinococcus bacteria.
MicrobiologyOpen (2017) Aug. 6(4).
doi: 10.1002/mbo3.477

Galia W. et al.
Strand-specific transcriptomes of Enterohemorrhagic Escherichia coli in response to interactions with ground beef microbiota: interactions between microorganisms in raw meat.
BMC Genomics (2017) Aug.18(1):574.
doi: 10.1186/s12864-017-3957-2

Belda E. et al.
Accurate microbial genome annotation using an integrated and user-friendly environment for community expertise of gene functions: The MicroScope Platform. In
Hydrocarbon and Lipid Microbiology Protocols: Genetic, Genomic and System Analyses of Pure Cultures (2017) pp 141-169. Berlin, Heidelberg
doi:

Lassalle F. et al.
Ancestral genome estimation reveals the history of ecological diversification in Agrobacterium.
Genome Biol Evol. (2017) Dec. 9(12):3413-3431.
doi: 10.1093/gbe/evx255