Bioinformatique

Charles-Elie Rabier et al.
On the inference of complex phylogenetic networks by Markov Chain Monte-Carlo
PLOS Computational Biology 2021, vol. 17, issue 9
doi: 10.1371/journal.pcbi.1008380

Manoela C. Brandão et al.
Macroscale patterns of oceanic zooplankton composition and size structure
Scientific Reports 2021, vol. 11, issue 1
doi: 10.1038/s41598-021-94615-5

Benjamin Istace et al.
Sequencing and Chromosome-Scale Assembly of Plant Genomes, Brassica rapa as a Use Case
Biology 2021, vol. 10, issue 8
doi: 10.3390/biology10080732

Julien Vibert et al.
Identification of Tissue of Origin and Guided Therapeutic Applications in Cancers of Unknown Primary Using Deep Learning and RNA Sequencing (TransCUPtomics)
The Journal of Molecular Diagnostics 2021, vol. 23, issue 10
doi: 10.1016/j.jmoldx.2021.07.009

Julien Vibert et al.
Identification of Tissue of Origin and Guided Therapeutic Applications in Cancers of Unknown Primary Using Deep Learning and RNA Sequencing (TransCUPtomics)
The Journal of Molecular Diagnostics 2021, vol. 23, issue 10
doi: 10.1016/j.jmoldx.2021.07.009

Sébastien Riquier et al.
Long non-coding RNA exploration for mesenchymal stem cell characterisation
BMC Genomics 2021, vol. 22, issue 1
doi: 10.1186/s12864-020-07289-0

Miriam I. Brandt et al.
Bioinformatic pipelines combining denoising and clustering tools allow for more comprehensive prokaryotic and eukaryotic metabarcoding
Molecular Ecology Resources 2021
doi: 10.1111/1755-0998.13398

Léa Meunier et al.
DNA Methylation Signatures Reveal the Diversity of Processes Remodeling Hepatocellular Carcinoma Methylomes
Hepatology 2021, vol. 74, issue 2
doi: 10.1002/hep.31796

Caroline Vernette et al.
The Ocean barcode atlas: A web service to explore the biodiversity and biogeography of marine organisms
Molecular Ecology Resources 2021, vol. 21, issue 4
doi: 10.1111/1755-0998.13322

Alexis Hardy et al.
DNAModAnnot: a R toolbox for DNA modification filtering and annotation
Bioinformatics 2021, vol. 37, issue 17
doi: 10.1093/bioinformatics/btab032