Bioinformatique

Jérôme Mariette et al.
An open-source tool to assess the carbon footprint of research
Environmental Research: Infrastructure and Sustainability 2022, vol. 2, issue 3
doi: 10.1088/2634-4505/ac84a4

Catherine Schramm et al.
Penetrance estimation of Alzheimer disease in SORL1 loss-of-function variant carriers using a family-based strategy and stratification by APOE genotypes
Genome Medicine 2022, vol. 14, issue 1
doi: 10.1186/s13073-022-01070-6

Bertrand Theulot et al.
Genome-wide mapping of individual replication fork velocities using nanopore sequencing
Nature Communications 2022, vol. 13, issue 1
doi: 10.1038/s41467-022-31012-0

Juan José Pierella Karlusich et al.
Coupling Imaging and Omics in Plankton Surveys: State-of-the-Art, Challenges, and Future Directions
Frontiers in Marine Science 2022, vol. 9
doi: 10.3389/fmars.2022.878803

Maëlle Daunesse et al.
ePeak: from replicated chromatin profiling data to epigenomic dynamics
NAR Genomics and Bioinformatics 2022, vol. 4, issue 2
doi: 10.1093/nargab/lqac041

Maxime Wack et al.
viroCapt: A Bioinformatics Pipeline for Identifying Viral Insertion in Human Host Genome
Studies in Health Technology and Informatics 2022
doi: 10.3233/shti220602

Rémi Tournebize et al.
Ecological and genomic vulnerability to climate change across native populations of Robusta coffee ( Coffea canephora )
Global Change Biology 2022, vol. 28, issue 13
doi: 10.1111/gcb.16191

Quentin Piet et al.
A chromosome-level, haplotype-phased Vanilla planifolia genome highlights the challenge of partial endoreplication for accurate whole-genome assembly
Plant Communications 2022, vol. 3, issue 5
doi: 10.1016/j.xplc.2022.100330

Stefano Gnan et al.
Kronos scRT: a uniform framework for single-cell replication timing analysis
Nature Communications 2022, vol. 13, issue 1
doi: 10.1038/s41467-022-30043-x

Antoine Régimbeau et al.
Contribution of genome‐scale metabolic modelling to niche theory
Ecology Letters 2022
doi: 10.1111/ele.13954