Bioinformatique

Yiyi Ma et al.
Analysis of Whole-Exome Sequencing Data for Alzheimer Disease Stratified by APOE Genotype
JAMA Neurology 2019, vol. 76, issue 9
doi: 10.1001/jamaneurol.2019.1456

Meng A et al.
A de novo approach to disentangle partner identity and function in holobiont systems
Microbiome 2018 6(1)
doi: 10.1186/s40168-018-0481-9

Opatovsky I et al.
Modeling trophic dependencies and exchanges among insects' bacterial symbionts in a host-simulated environment
BMC Genomics 2018 19(1)
doi: 10.1186/s12864-018-4786-7

Villar E et al.
The Ocean Gene Atlas: exploring the biogeography of plankton genes online
Nucleic Acids Research 2018 46(W1)
doi: 10.1093/nar/gky376

Marchet C et al.
De novo clustering of long reads by gene from transcriptomics data
Nucleic Acids Research 2018 47(1)
doi: 10.1093/nar/gky834

Melloni GEM et al.
Precision Trial Drawer, a Computational Tool to Assist Planning of Genomics-Driven Trials in Oncology
JCO Precision Oncology 2018 2
doi: 10.1200/PO.18.00015

Baudrin LG et al.
Molecular and Computational Methods for the Detection of Microsatellite Instability in Cancer
Frontiers in Oncology 2018 8
doi: 10.3389/fonc.2018.00621

Deveau P et al.
QuantumClone: clonal assessment of functional mutations in cancer based on a genotype-aware method for clonal reconstruction
Bioinformatics 2018 34(11)
doi: 10.1093/bioinformatics/bty016

Khan W et al.
MACARON: a python framework to identify and re-annotate multi-base affected codons in whole genome/exome sequence data
Bioinformatics 2018 34(19)
doi: 10.1093/bioinformatics/bty382

Perron G et al.
A General Framework for Interrogation of mRNA Stability Programs Identifies RNA-Binding Proteins that Govern Cancer Transcriptomes
Cell Reports 2018 23(6)
doi: 10.1016/j.celrep.2018.04.031