News

Microbial diversity in PDO cheeses

The MetaPDOCheese project, awarded of the AAP France Genomics 2017, enabled the first metagenomic analysis (Irlinger F et al. 2024) of 44 varieties of AOP matured cheeses and the identification of a…

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Alternative splicing in response to Listeria infection

A team from ENS Paris with the help from GenomiqueENS platform studied the response and the reorganization of gene expression in cells due to the introduction of bacteria. They combined long- and…

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Single-cell atlas of the whole human lung

First integrated Human Lung Cell Atlas reveals insights into lung diseases The largest and most comprehensive cell map of the Human Lung was recently published in Nature Medicine (Link). Revealing…

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Inflammation and cancer: the role of copper identified

A new study published in the journal Nature has identified A druggable copper-signaling pathway that drives inflammation. The study was led by researchers from the Institut Curie in Paris, France,…

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Marine RNA viruses

From the “Tara Oceans” project partially funded by France Génomique: 2 major publications in Science describing the taxonomy, distribution and evolution of RNA viruses as well as their ecological…

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Pro-inflammatory cytokines regulation through Ikaros

GenomEast is co-authors of a multi-omics study (RNA, ATAC, CHIPseq) that elucidates the role of the Ikaros repressor in the regulation of pro-inflammatory cytokines that, when overexpressed, lead to…

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Identification of SARS-COV2 host cells

As part of the Human Cell Atlas Lung Biological Network consortium and research to understand the mechanism of infection of Covid-19 disease, IPMC/UCAGenomiX scRNAseq studies have identified…

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CAF-S1 fibroblast clusters and immunotheraty response

The sequencing  platform of Institut Curie has participated to a significant advance in the identification of CAF-S1 fibroblast clusters associated with  resistance to cancer immunotherapies ( CANCER…

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SCNaUMI

K Lebrigand et al. describe a new approach for assigning UMIs "SCNaUMI"  ( Nat.Commun. 2020 ;doi: 10.1038/s41467-020-17800-6), which allows the precise identification, from single cells, of…

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The 1st cell atlas of the human airways

P Barbry's team and the UCAGenomiX platform publish the 1st human airway cell atlas by scRNA-seq analysis (Am. J. Respir. Crit. Care. Med 2020; doi: 10.1164/rccm.201911-2199OC). This study…

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Oak genomics

The consortium in which Genoscope is a major contributor is publishing a special issue of the "New Phytologist" devoted to the genomics of oak and its genetic flexibility that allows its adaptability…

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Assembly and annotation of the pea genome

Last week, the Genoscope published the first reference sequence of the pea (a project resulting from the France Genomics Call for Proposals) by combining several methodologies (short and long NGS…

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NF-Y controls transcription

The ATGC platform has published a comprehensive genomic study in mouse embryonic stem cells , that describes NF-Y’s mechanistic critical role at promoters to direct the transcription machinery to the…

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Giant pandoraviruses create their own genes

France Génomique participated in the identification of 3 new members of the pandoravirus family. Published in Nature Comm. June 2018, genomic analyses show that these new members possess a large…

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“Grands Projets de Génomique” 2016

Voici la liste des projets sélectionnés dans le cadre de l' Appel à Projet Grand Projet de Génomique 2016 de France Génomique : Résultats AAP "Grands Projets de Génomique" 2016

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